Difference between revisions of "RNA Seq on HPC (using Trinity)"

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[[ 2. Quality trimming ]]
 
[[ 2. Quality trimming ]]
  
[[ 3. In silico read normalisation ]]
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[[ 3. Running Trinity]]
  
[[ 4. Running Trinity]]
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[[ 4. Evaluating the assembly ]]
  
[[ 5. Evaluating the assembly ]]
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[[ 5. Abundance estimation using RSEM ]]
  
[[ 6. Abundance estimation using RSEM ]]
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[[ 6. Construct an expression matrix ]]
  
[[ 7. Construct an expression matrix ]]
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[[ 7. Evaluating the assembly with ExN50 ]]
  
[[ 8. Evaluating the assembly with ExN50 ]]
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[[ 8. Expression analysis ]]
 
 
[[ 9. Expression analysis ]]
 

Revision as of 14:28, 6 March 2017