Difference between revisions of "1.1 RNA-Seq analysis tools"
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| + | ! scope="row"| Trimmomatic | ||
| + | |Home | ||
| + | | http://www.usadellab.org/cms/?page=trimmomatic | ||
| + | |- | ||
| + | ! scope="row"| | ||
| + | |Program | ||
| + | | http://www.usadellab.org/cms/?page=trimmomatic | ||
| + | |- | ||
| + | ! scope="row"| | ||
| + | |Manual | ||
| + | | http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/TrimmomaticManual_V0.32.pdf | ||
| + | |- | ||
Revision as of 20:33, 24 January 2016
The table below provides the tools for RNA-Seq analysis that you will use in this tutorial.
| Tool | Type | URLs |
|---|---|---|
| FASTQC | Home | http://www.bioinformatics.babraham.ac.uk/projects/fastqc/ |
| Program | http://www.bioinformatics.babraham.ac.uk/projects/download.html#fastqc | |
| Manual | http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/ | |
| Trimmomatic | Home | http://www.usadellab.org/cms/?page=trimmomatic |
| Program | http://www.usadellab.org/cms/?page=trimmomatic | |
| Manual | http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/TrimmomaticManual_V0.32.pdf | |
| Total | $1.90 | brrr |
